Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web
Identifieur interne : 000D75 ( Main/Exploration ); précédent : 000D74; suivant : 000D76Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web
Auteurs : Duncan Hull [Royaume-Uni] ; Steve R. Pettifer [Royaume-Uni] ; Douglas B. Kell [Royaume-Uni]Source :
- PLoS Computational Biology [ 1553-734X ] ; 2008.
Abstract
Many scientists now manage the bulk of their bibliographic information electronically, thereby organizing their publications and citation material from digital libraries. However, a library has been described as “thought in cold storage,” and unfortunately many digital libraries can be cold, impersonal, isolated, and inaccessible places. In this Review, we discuss the current chilly state of digital libraries for the computational biologist, including PubMed, IEEE Xplore, the ACM digital library, ISI Web of Knowledge, Scopus, Citeseer, arXiv, DBLP, and Google Scholar. We illustrate the current process of using these libraries with a typical workflow, and highlight problems with managing data and metadata using URIs. We then examine a range of new applications such as Zotero, Mendeley, Mekentosj Papers, MyNCBI, CiteULike, Connotea, and HubMed that exploit the Web to make these digital libraries more personal, sociable, integrated, and accessible places. We conclude with how these applications may begin to help achieve a digital defrost, and discuss some of the issues that will help or hinder this in terms of making libraries on the Web warmer places in the future, becoming resources that are considerably more useful to both humans and machines.
Url:
DOI: 10.1371/journal.pcbi.1000204
PubMed: 18974831
PubMed Central: 2568856
Affiliations:
Links toward previous steps (curation, corpus...)
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Le document en format XML
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Pettifer</name><affiliation wicri:level="4"><nlm:aff id="aff2"><addr-line>The Manchester Interdisciplinary Biocentre, The University of Manchester, Manchester, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>The Manchester Interdisciplinary Biocentre, The University of Manchester, Manchester</wicri:regionArea><placeName><settlement type="city">Manchester</settlement><region type="country">Angleterre</region><region type="région" nuts="1">Grand Manchester</region></placeName><orgName type="university">Université de Manchester</orgName></affiliation><affiliation wicri:level="4"><nlm:aff id="aff3"><addr-line>School of Computer Science, The University of Manchester, Manchester, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>School of Computer Science, The University of Manchester, Manchester</wicri:regionArea><placeName><settlement type="city">Manchester</settlement><region type="country">Angleterre</region><region type="région" nuts="1">Grand Manchester</region></placeName><orgName type="university">Université de Manchester</orgName></affiliation></author><author><name sortKey="Kell, Douglas B" sort="Kell, Douglas B" uniqKey="Kell D" first="Douglas B." last="Kell">Douglas B. Kell</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>School of Chemistry, The University of Manchester, Manchester, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>School of Chemistry, The University of Manchester, Manchester</wicri:regionArea><placeName><settlement type="city">Manchester</settlement><region type="country">Angleterre</region><region type="région" nuts="1">Grand Manchester</region></placeName><orgName type="university">Université de Manchester</orgName></affiliation><affiliation wicri:level="4"><nlm:aff id="aff2"><addr-line>The Manchester Interdisciplinary Biocentre, The University of Manchester, Manchester, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>The Manchester Interdisciplinary Biocentre, The University of Manchester, Manchester</wicri:regionArea><placeName><settlement type="city">Manchester</settlement><region type="country">Angleterre</region><region type="région" nuts="1">Grand Manchester</region></placeName><orgName type="university">Université de Manchester</orgName></affiliation></author></analytic><series><title level="j">PLoS Computational Biology</title><idno type="ISSN">1553-734X</idno><idno type="eISSN">1553-7358</idno><imprint><date when="2008">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Many scientists now manage the bulk of their bibliographic information electronically, thereby organizing their publications and citation material from digital libraries. However, a library has been described as “thought in cold storage,” and unfortunately many digital libraries can be cold, impersonal, isolated, and inaccessible places. In this Review, we discuss the current chilly state of digital libraries for the computational biologist, including PubMed, IEEE Xplore, the ACM digital library, ISI Web of Knowledge, Scopus, Citeseer, arXiv, DBLP, and Google Scholar. We illustrate the current process of using these libraries with a typical workflow, and highlight problems with managing data and metadata using URIs. We then examine a range of new applications such as Zotero, Mendeley, Mekentosj Papers, MyNCBI, CiteULike, Connotea, and HubMed that exploit the Web to make these digital libraries more personal, sociable, integrated, and accessible places. We conclude with how these applications may begin to help achieve a digital defrost, and discuss some of the issues that will help or hinder this in terms of making libraries on the Web warmer places in the future, becoming resources that are considerably more useful to both humans and machines.</p></div></front><back><div1 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Manchester</li></region><settlement><li>Manchester</li></settlement><orgName><li>Université de Manchester</li></orgName></list><tree><country name="Royaume-Uni"><region name="Angleterre"><name sortKey="Hull, Duncan" sort="Hull, Duncan" uniqKey="Hull D" first="Duncan" last="Hull">Duncan Hull</name></region><name sortKey="Hull, Duncan" sort="Hull, Duncan" uniqKey="Hull D" first="Duncan" last="Hull">Duncan Hull</name><name sortKey="Kell, Douglas B" sort="Kell, Douglas B" uniqKey="Kell D" first="Douglas B." last="Kell">Douglas B. 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